Cluster: Rep_988_CGC37
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_988
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_988_c_14 | Rep_988_c_14_825 | 852238 | 853539 | + | 2.A.1.14.2 |
| CAZyme | Rep_988_c_14 | Rep_988_c_14_826 | 853557 | 855920 | + | GH31_2 |
| TC | Rep_988_c_14 | Rep_988_c_14_827 | 856108 | 857703 | - | 3.A.1.121.4 |
| peptidase | Rep_988_c_14 | Rep_988_c_14_828 | 857926 | 858846 | + | C82.UPB |
| TF | Rep_988_c_14 | Rep_988_c_14_829 | 858889 | 859605 | - | GntR |
| TC | Rep_988_c_14 | Rep_988_c_14_830 | 859621 | 860943 | - | 4.A.3.2.9 |
| CAZyme | Rep_988_c_14 | Rep_988_c_14_831 | 860995 | 862371 | - | GH1 |
| TC | Rep_988_c_14 | Rep_988_c_14_832 | 862520 | 863560 | - | 8.A.5.1.3 |
| TC | Rep_988_c_14 | Rep_988_c_14_833 | 863663 | 865186 | - | 1.B.17.3.8 |
| TC | Rep_988_c_14 | Rep_988_c_14_834 | 865186 | 866757 | - | 2.A.1.3.2 |
| TC | Rep_988_c_14 | Rep_988_c_14_835 | 866754 | 867848 | - | 8.A.1.1.2 |
| TC | Rep_988_c_14 | Rep_988_c_14_836 | 867950 | 869059 | - | 2.A.45.2.5 |
Gene ID: Rep_988_c_14_825
Type: TC
Location: 852238 - 853539 (+)
Type: TC
Location: 852238 - 853539 (+)
Gene ID: Rep_988_c_14_826
Type: CAZyme
Location: 853557 - 855920 (+)
Type: CAZyme
Location: 853557 - 855920 (+)
Gene ID: Rep_988_c_14_827
Type: TC
Location: 856108 - 857703 (-)
Type: TC
Location: 856108 - 857703 (-)
Gene ID: Rep_988_c_14_828
Type: peptidase
Location: 857926 - 858846 (+)
Type: peptidase
Location: 857926 - 858846 (+)
Gene ID: Rep_988_c_14_829
Type: TF
Location: 858889 - 859605 (-)
Type: TF
Location: 858889 - 859605 (-)
Gene ID: Rep_988_c_14_830
Type: TC
Location: 859621 - 860943 (-)
Type: TC
Location: 859621 - 860943 (-)
Gene ID: Rep_988_c_14_831
Type: CAZyme
Location: 860995 - 862371 (-)
Type: CAZyme
Location: 860995 - 862371 (-)
Gene ID: Rep_988_c_14_832
Type: TC
Location: 862520 - 863560 (-)
Type: TC
Location: 862520 - 863560 (-)
Gene ID: Rep_988_c_14_833
Type: TC
Location: 863663 - 865186 (-)
Type: TC
Location: 863663 - 865186 (-)
Gene ID: Rep_988_c_14_834
Type: TC
Location: 865186 - 866757 (-)
Type: TC
Location: 865186 - 866757 (-)
Gene ID: Rep_988_c_14_835
Type: TC
Location: 866754 - 867848 (-)
Type: TC
Location: 866754 - 867848 (-)
Gene ID: Rep_988_c_14_836
Type: TC
Location: 867950 - 869059 (-)
Type: TC
Location: 867950 - 869059 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter cloacae_M
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_988_c_14_825 | vegetarian > omnivore | 1.20539 | 0.03403 |
| Rep_988_c_14_826 | vegan > omnivore | 1.31716 | 0.01560 |
| Rep_988_c_14_830 | vegetarian > omnivore | 1.08009 | 0.03403 |
| Rep_988_c_14_830 | vegetarian > vegan | 1.24180 | 0.04151 |
| Rep_988_c_14_831 | vegetarian > omnivore | 1.06600 | 0.03403 |
| Rep_988_c_14_832 | vegetarian > omnivore | 1.99870 | 0.03403 |
| Rep_988_c_14_833 | vegetarian > omnivore | 1.21343 | 0.03403 |