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Cluster: Rep_988_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_988_c_14 Rep_988_c_14_636 638983 639915 - CE4
pfam Rep_988_c_14 Rep_988_c_14_637 639931 640674 - Asp_Glu_race
TF Rep_988_c_14 Rep_988_c_14_638 640674 641390 - GntR
TC Rep_988_c_14 Rep_988_c_14_639 641535 643031 + 2.A.39.3.4
peptidase Rep_988_c_14 Rep_988_c_14_640 643134 644450 + M38.UNW
TC Rep_988_c_14 Rep_988_c_14_641 644430 644753 - 9.B.35.1.2
Gene ID: Rep_988_c_14_636
Type: CAZyme
Location: 638983 - 639915 (-)
Gene ID: Rep_988_c_14_637
Type: pfam
Location: 639931 - 640674 (-)
Gene ID: Rep_988_c_14_638
Type: TF
Location: 640674 - 641390 (-)
Gene ID: Rep_988_c_14_639
Type: TC
Location: 641535 - 643031 (+)
Gene ID: Rep_988_c_14_640
Type: peptidase
Location: 643134 - 644450 (+)
Gene ID: Rep_988_c_14_641
Type: TC
Location: 644430 - 644753 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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