Cluster: Rep_988_CGC34
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_988
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_988_c_14 | Rep_988_c_14_611 | 618301 | 619623 | + | 2.A.40.1.3 |
| pfam | Rep_988_c_14 | Rep_988_c_14_612 | 619697 | 620218 | - | Acetyltransf_1 |
| pfam | Rep_988_c_14 | Rep_988_c_14_613 | 620225 | 620494 | - | TacA1 |
| TC | Rep_988_c_14 | Rep_988_c_14_614 | 620556 | 621473 | - | 2.A.7.3.52 |
| pfam | Rep_988_c_14 | Rep_988_c_14_615 | 621591 | 621761 | - | KGG | KGG |
| CAZyme | Rep_988_c_14 | Rep_988_c_14_616 | 622152 | 622748 | + | AA6 |
Gene ID: Rep_988_c_14_611
Type: TC
Location: 618301 - 619623 (+)
Type: TC
Location: 618301 - 619623 (+)
Gene ID: Rep_988_c_14_612
Type: pfam
Location: 619697 - 620218 (-)
Type: pfam
Location: 619697 - 620218 (-)
Gene ID: Rep_988_c_14_613
Type: pfam
Location: 620225 - 620494 (-)
Type: pfam
Location: 620225 - 620494 (-)
Gene ID: Rep_988_c_14_614
Type: TC
Location: 620556 - 621473 (-)
Type: TC
Location: 620556 - 621473 (-)
Gene ID: Rep_988_c_14_615
Type: pfam
Location: 621591 - 621761 (-)
Type: pfam
Location: 621591 - 621761 (-)
Gene ID: Rep_988_c_14_616
Type: CAZyme
Location: 622152 - 622748 (+)
Type: CAZyme
Location: 622152 - 622748 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter cloacae_M
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_988_c_14_614 | vegetarian > omnivore | 1.52921 | 0.03322 |
| Rep_988_c_14_614 | vegetarian > vegan | 1.87737 | 0.03692 |
| Rep_988_c_14_615 | vegetarian > omnivore | 1.36034 | 0.03403 |
| Rep_988_c_14_615 | vegetarian > vegan | 2.57548 | 0.03565 |