Cluster: Rep_988_CGC30
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_988
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_988_c_14 | Rep_988_c_14_381 | 395230 | 396585 | - | GH4 |
| TF | Rep_988_c_14 | Rep_988_c_14_382 | 396695 | 397513 | - | HTH_AraC |
| TC | Rep_988_c_14 | Rep_988_c_14_383 | 397543 | 397890 | - | 4.A.3.2.1 |
| TC | Rep_988_c_14 | Rep_988_c_14_384 | 397938 | 399296 | - | 4.A.3.2.1 |
| TC | Rep_988_c_14 | Rep_988_c_14_385 | 399376 | 399693 | - | 4.A.3.2.1 |
Gene ID: Rep_988_c_14_381
Type: CAZyme
Location: 395230 - 396585 (-)
Type: CAZyme
Location: 395230 - 396585 (-)
Gene ID: Rep_988_c_14_382
Type: TF
Location: 396695 - 397513 (-)
Type: TF
Location: 396695 - 397513 (-)
Gene ID: Rep_988_c_14_383
Type: TC
Location: 397543 - 397890 (-)
Type: TC
Location: 397543 - 397890 (-)
Gene ID: Rep_988_c_14_384
Type: TC
Location: 397938 - 399296 (-)
Type: TC
Location: 397938 - 399296 (-)
Gene ID: Rep_988_c_14_385
Type: TC
Location: 399376 - 399693 (-)
Type: TC
Location: 399376 - 399693 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter cloacae_M
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_988_c_14_382 | vegetarian > omnivore | 1.58613 | 0.03403 |
| Rep_988_c_14_382 | vegetarian > vegan | 1.23226 | 0.04151 |