Cluster: Rep_988_CGC23
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_988
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_988_c_11 | Rep_988_c_11_112 | 129908 | 130495 | - | 9.B.29.3.1 |
| TC | Rep_988_c_11 | Rep_988_c_11_113 | 130653 | 131225 | + | 9.B.27.2.7 |
| sulfatase | Rep_988_c_11 | Rep_988_c_11_114 | 131313 | 132077 | - | S1_4 |
| TC | Rep_988_c_11 | Rep_988_c_11_115 | 132128 | 133546 | - | 1.B.17.3.10 |
| CAZyme | Rep_988_c_11 | Rep_988_c_11_116 | 133873 | 135267 | - | GH1 |
| TC | Rep_988_c_11 | Rep_988_c_11_117 | 135280 | 137133 | - | 4.A.1.2.2 |
Gene ID: Rep_988_c_11_112
Type: TC
Location: 129908 - 130495 (-)
Type: TC
Location: 129908 - 130495 (-)
Gene ID: Rep_988_c_11_113
Type: TC
Location: 130653 - 131225 (+)
Type: TC
Location: 130653 - 131225 (+)
Gene ID: Rep_988_c_11_114
Type: sulfatase
Location: 131313 - 132077 (-)
Type: sulfatase
Location: 131313 - 132077 (-)
Gene ID: Rep_988_c_11_115
Type: TC
Location: 132128 - 133546 (-)
Type: TC
Location: 132128 - 133546 (-)
Gene ID: Rep_988_c_11_116
Type: CAZyme
Location: 133873 - 135267 (-)
Type: CAZyme
Location: 133873 - 135267 (-)
Gene ID: Rep_988_c_11_117
Type: TC
Location: 135280 - 137133 (-)
Type: TC
Location: 135280 - 137133 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter cloacae_M
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_988_c_11_113 | vegetarian > omnivore | 1.17673 | 0.03403 |
| Rep_988_c_11_115 | vegetarian > omnivore | 2.16663 | 0.03339 |
| Rep_988_c_11_115 | vegetarian > vegan | 1.34771 | 0.04151 |