Cluster: Rep_988_CGC22
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_988
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_988_c_11 | Rep_988_c_11_101 | 117124 | 118809 | - | 9.B.33.1.1 |
| TF | Rep_988_c_11 | Rep_988_c_11_102 | 119027 | 119767 | + | MerR |
| NULL(UNKNOWN) | Rep_988_c_11 | Rep_988_c_11_103 | 119837 | 119950 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_988_c_11 | Rep_988_c_11_104 | 119925 | 120662 | - | 3.A.1.12.15 |
| TC | Rep_988_c_11 | Rep_988_c_11_105 | 120646 | 121596 | - | 3.A.1.12.15 |
| TC | Rep_988_c_11 | Rep_988_c_11_106 | 121589 | 122746 | - | 3.A.1.12.15 |
| TC | Rep_988_c_11 | Rep_988_c_11_107 | 122759 | 123676 | - | 3.A.1.12.15 |
| CAZyme | Rep_988_c_11 | Rep_988_c_11_108 | 123821 | 126118 | - | GH3 |
Gene ID: Rep_988_c_11_101
Type: TC
Location: 117124 - 118809 (-)
Type: TC
Location: 117124 - 118809 (-)
Gene ID: Rep_988_c_11_102
Type: TF
Location: 119027 - 119767 (+)
Type: TF
Location: 119027 - 119767 (+)
Gene ID: Rep_988_c_11_103
Type:
Location: 119837 - 119950 (+)
Type:
Location: 119837 - 119950 (+)
Gene ID: Rep_988_c_11_104
Type: TC
Location: 119925 - 120662 (-)
Type: TC
Location: 119925 - 120662 (-)
Gene ID: Rep_988_c_11_105
Type: TC
Location: 120646 - 121596 (-)
Type: TC
Location: 120646 - 121596 (-)
Gene ID: Rep_988_c_11_106
Type: TC
Location: 121589 - 122746 (-)
Type: TC
Location: 121589 - 122746 (-)
Gene ID: Rep_988_c_11_107
Type: TC
Location: 122759 - 123676 (-)
Type: TC
Location: 122759 - 123676 (-)
Gene ID: Rep_988_c_11_108
Type: CAZyme
Location: 123821 - 126118 (-)
Type: CAZyme
Location: 123821 - 126118 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter cloacae_M
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_988_c_11_102 | vegetarian > omnivore | 1.56963 | 0.03339 |
| Rep_988_c_11_102 | vegetarian > vegan | 1.28690 | 0.04151 |
| Rep_988_c_11_103 | vegetarian > omnivore | 2.92345 | 0.03403 |
| Rep_988_c_11_103 | vegetarian > vegan | 1.63169 | 0.04151 |
| Rep_988_c_11_104 | vegetarian > omnivore | 1.44941 | 0.03403 |
| Rep_988_c_11_104 | vegetarian > vegan | 1.52459 | 0.04151 |
| Rep_988_c_11_107 | vegetarian > omnivore | 1.14153 | 0.03403 |