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Cluster: Rep_988_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_988_c_11 Rep_988_c_11_37 37364 38584 - GT4
pfam Rep_988_c_11 Rep_988_c_11_38 38581 39861 - PS_pyruv_trans
TC Rep_988_c_11 Rep_988_c_11_39 39879 41357 - 2.A.66.2.7
TC Rep_988_c_11 Rep_988_c_11_40 41359 42753 - 9.B.18.1.1
pfam Rep_988_c_11 Rep_988_c_11_41 42800 44170 - PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
pfam Rep_988_c_11 Rep_988_c_11_42 44283 45719 - NTP_transferase | MannoseP_isomer | Cupin_2 | NTP_transf_3 | ManC_GMP_beta-helix
CAZyme Rep_988_c_11 Rep_988_c_11_43 45723 46946 - GT4
Gene ID: Rep_988_c_11_37
Type: CAZyme
Location: 37364 - 38584 (-)
Gene ID: Rep_988_c_11_38
Type: pfam
Location: 38581 - 39861 (-)
Gene ID: Rep_988_c_11_39
Type: TC
Location: 39879 - 41357 (-)
Gene ID: Rep_988_c_11_40
Type: TC
Location: 41359 - 42753 (-)
Gene ID: Rep_988_c_11_41
Type: pfam
Location: 42800 - 44170 (-)
Gene ID: Rep_988_c_11_42
Type: pfam
Location: 44283 - 45719 (-)
Gene ID: Rep_988_c_11_43
Type: CAZyme
Location: 45723 - 46946 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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