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Cluster: Rep_988_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_988_c_8 Rep_988_c_8_267 288509 289693 + GH23
pfam Rep_988_c_8 Rep_988_c_8_268 289746 290519 - Ubie_methyltran | Methyltransf_29 | TehB | Methyltransf_8 | MTS | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
pfam Rep_988_c_8 Rep_988_c_8_269 290595 291419 - Exo_endo_phos
TC Rep_988_c_8 Rep_988_c_8_270 291532 292707 - 2.A.1.2.65
Gene ID: Rep_988_c_8_267
Type: CAZyme
Location: 288509 - 289693 (+)
Gene ID: Rep_988_c_8_268
Type: pfam
Location: 289746 - 290519 (-)
Gene ID: Rep_988_c_8_269
Type: pfam
Location: 290595 - 291419 (-)
Gene ID: Rep_988_c_8_270
Type: TC
Location: 291532 - 292707 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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