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Cluster: Rep_988_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_988_c_6 Rep_988_c_6_468 493152 493625 + 4.A.6.1.4
TC Rep_988_c_6 Rep_988_c_6_469 493636 494415 + 4.A.6.1.4
TC Rep_988_c_6 Rep_988_c_6_470 494405 495283 + 4.A.6.1.4
TC Rep_988_c_6 Rep_988_c_6_471 495300 495734 + 4.A.6.1.2
CAZyme Rep_988_c_6 Rep_988_c_6_472 495731 496864 + CE9
STP Rep_988_c_6 Rep_988_c_6_473 497111 498259 + SIS | SIS
pfam Rep_988_c_6 Rep_988_c_6_474 498272 499144 + F_bP_aldolase
CAZyme Rep_988_c_6 Rep_988_c_6_475 499165 501054 + GH36
Gene ID: Rep_988_c_6_468
Type: TC
Location: 493152 - 493625 (+)
Gene ID: Rep_988_c_6_469
Type: TC
Location: 493636 - 494415 (+)
Gene ID: Rep_988_c_6_470
Type: TC
Location: 494405 - 495283 (+)
Gene ID: Rep_988_c_6_471
Type: TC
Location: 495300 - 495734 (+)
Gene ID: Rep_988_c_6_472
Type: CAZyme
Location: 495731 - 496864 (+)
Gene ID: Rep_988_c_6_473
Type: STP
Location: 497111 - 498259 (+)
Gene ID: Rep_988_c_6_474
Type: pfam
Location: 498272 - 499144 (+)
Gene ID: Rep_988_c_6_475
Type: CAZyme
Location: 499165 - 501054 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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