Cluster: Rep_988_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_988
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_988_c_6 | Rep_988_c_6_245 | 267379 | 268038 | - | 1.C.113.1.10 |
| pfam | Rep_988_c_6 | Rep_988_c_6_246 | 268204 | 268515 | - | ASCH |
| TF | Rep_988_c_6 | Rep_988_c_6_247 | 268567 | 269298 | + | HTH_6 |
| CAZyme | Rep_988_c_6 | Rep_988_c_6_248 | 269415 | 270848 | + | GH1 |
Gene ID: Rep_988_c_6_245
Type: TC
Location: 267379 - 268038 (-)
Type: TC
Location: 267379 - 268038 (-)
Gene ID: Rep_988_c_6_246
Type: pfam
Location: 268204 - 268515 (-)
Type: pfam
Location: 268204 - 268515 (-)
Gene ID: Rep_988_c_6_247
Type: TF
Location: 268567 - 269298 (+)
Type: TF
Location: 268567 - 269298 (+)
Gene ID: Rep_988_c_6_248
Type: CAZyme
Location: 269415 - 270848 (+)
Type: CAZyme
Location: 269415 - 270848 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter cloacae_M
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_988_c_6_247 | vegetarian > vegan | 1.26334 | 0.04151 |
| Rep_988_c_6_248 | vegan > omnivore | 1.55146 | 0.01560 |
| Rep_988_c_6_248 | vegetarian > omnivore | 1.04905 | 0.03403 |