Cluster: Rep_987_CGC57
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_987
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_987_c_25 | Rep_987_c_25_20 | 19817 | 21280 | + | GH1 |
| pfam | Rep_987_c_25 | Rep_987_c_25_21 | 21324 | 23585 | - | Meth_synt_2 | Meth_synt_2 | Meth_synt_1 |
| TF | Rep_987_c_25 | Rep_987_c_25_22 | 23822 | 24775 | + | HTH_1 |
| TC | Rep_987_c_25 | Rep_987_c_25_23 | 24663 | 25562 | - | 2.A.7.3.61 |
| pfam | Rep_987_c_25 | Rep_987_c_25_24 | 25645 | 26445 | - | Hydrolase | S6PP | S6PP | Hydrolase_3 |
| peptidase | Rep_987_c_25 | Rep_987_c_25_25 | 26471 | 27463 | - | S33.UNW |
| TC | Rep_987_c_25 | Rep_987_c_25_26 | 27573 | 28193 | + | 2.A.76.1.1 |
| TC | Rep_987_c_25 | Rep_987_c_25_27 | 28190 | 28810 | - | 2.A.76.1.2 |
| TC | Rep_987_c_25 | Rep_987_c_25_28 | 28872 | 30701 | - | 2.A.16.2.2 |
| pfam | Rep_987_c_25 | Rep_987_c_25_29 | 30792 | 31661 | - | PLA1 |
| pfam | Rep_987_c_25 | Rep_987_c_25_30 | 31825 | 32292 | + | 4HBT | 4HBT_3 |
| TC | Rep_987_c_25 | Rep_987_c_25_31 | 32344 | 33240 | + | 2.A.7.7.2 |
| TC | Rep_987_c_25 | Rep_987_c_25_32 | 33284 | 34234 | - | 1.A.35.1.2 |
Gene ID: Rep_987_c_25_20
Type: CAZyme
Location: 19817 - 21280 (+)
Type: CAZyme
Location: 19817 - 21280 (+)
Gene ID: Rep_987_c_25_21
Type: pfam
Location: 21324 - 23585 (-)
Type: pfam
Location: 21324 - 23585 (-)
Gene ID: Rep_987_c_25_22
Type: TF
Location: 23822 - 24775 (+)
Type: TF
Location: 23822 - 24775 (+)
Gene ID: Rep_987_c_25_23
Type: TC
Location: 24663 - 25562 (-)
Type: TC
Location: 24663 - 25562 (-)
Gene ID: Rep_987_c_25_24
Type: pfam
Location: 25645 - 26445 (-)
Type: pfam
Location: 25645 - 26445 (-)
Gene ID: Rep_987_c_25_25
Type: peptidase
Location: 26471 - 27463 (-)
Type: peptidase
Location: 26471 - 27463 (-)
Gene ID: Rep_987_c_25_26
Type: TC
Location: 27573 - 28193 (+)
Type: TC
Location: 27573 - 28193 (+)
Gene ID: Rep_987_c_25_27
Type: TC
Location: 28190 - 28810 (-)
Type: TC
Location: 28190 - 28810 (-)
Gene ID: Rep_987_c_25_28
Type: TC
Location: 28872 - 30701 (-)
Type: TC
Location: 28872 - 30701 (-)
Gene ID: Rep_987_c_25_29
Type: pfam
Location: 30792 - 31661 (-)
Type: pfam
Location: 30792 - 31661 (-)
Gene ID: Rep_987_c_25_30
Type: pfam
Location: 31825 - 32292 (+)
Type: pfam
Location: 31825 - 32292 (+)
Gene ID: Rep_987_c_25_31
Type: TC
Location: 32344 - 33240 (+)
Type: TC
Location: 32344 - 33240 (+)
Gene ID: Rep_987_c_25_32
Type: TC
Location: 33284 - 34234 (-)
Type: TC
Location: 33284 - 34234 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter sichuanensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.