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Cluster: Rep_987_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_987_c_10 Rep_987_c_10_73 85580 86803 + GT4
pfam Rep_987_c_10 Rep_987_c_10_74 86807 88243 + NTP_transferase | MannoseP_isomer | Cupin_2 | NTP_transf_3 | ManC_GMP_beta-helix
pfam Rep_987_c_10 Rep_987_c_10_75 88353 89723 + PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
TC Rep_987_c_10 Rep_987_c_10_76 89770 91164 + 9.B.18.1.1
TC Rep_987_c_10 Rep_987_c_10_77 91166 92644 + 2.A.66.2.7
pfam Rep_987_c_10 Rep_987_c_10_78 92662 93942 + PS_pyruv_trans
CAZyme Rep_987_c_10 Rep_987_c_10_79 93939 95159 + GT4
Gene ID: Rep_987_c_10_73
Type: CAZyme
Location: 85580 - 86803 (+)
Gene ID: Rep_987_c_10_74
Type: pfam
Location: 86807 - 88243 (+)
Gene ID: Rep_987_c_10_75
Type: pfam
Location: 88353 - 89723 (+)
Gene ID: Rep_987_c_10_76
Type: TC
Location: 89770 - 91164 (+)
Gene ID: Rep_987_c_10_77
Type: TC
Location: 91166 - 92644 (+)
Gene ID: Rep_987_c_10_78
Type: pfam
Location: 92662 - 93942 (+)
Gene ID: Rep_987_c_10_79
Type: CAZyme
Location: 93939 - 95159 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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