dbCAN HGM

Cluster: Rep_987_CGC32

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	Rep_987_c_7	Rep_987_c_7_40	44773	45960	-	2.A.1.2.26
TF	Rep_987_c_7	Rep_987_c_7_41	46076	47032	+	HTH_AraC \| HTH_AraC
TC	Rep_987_c_7	Rep_987_c_7_42	47046	48425	-	1.B.15.1.1
TC	Rep_987_c_7	Rep_987_c_7_43	48520	49878	-	2.A.2.3.4
CAZyme	Rep_987_c_7	Rep_987_c_7_44	50245	51930	+	GH37
TC	Rep_987_c_7	Rep_987_c_7_45	51992	54142	-	1.B.14.1.2
TC	Rep_987_c_7	Rep_987_c_7_46	54208	54462	-	1.E.43.1.1
pfam	Rep_987_c_7	Rep_987_c_7_47	54669	55400	+	PilZ \| PilZN
CAZyme	Rep_987_c_7	Rep_987_c_7_48	55439	56050	-	GH23
peptidase	Rep_987_c_7	Rep_987_c_7_49	56157	57071	+	S66.002
TC	Rep_987_c_7	Rep_987_c_7_50	57169	58902	+	2.A.36.6.11

Gene ID: Rep_987_c_7_40
Type: TC
Location: 44773 - 45960 (-)

Gene ID: Rep_987_c_7_41
Type: TF
Location: 46076 - 47032 (+)

Gene ID: Rep_987_c_7_42
Type: TC
Location: 47046 - 48425 (-)

Gene ID: Rep_987_c_7_43
Type: TC
Location: 48520 - 49878 (-)

Gene ID: Rep_987_c_7_44
Type: CAZyme
Location: 50245 - 51930 (+)

Gene ID: Rep_987_c_7_45
Type: TC
Location: 51992 - 54142 (-)

Gene ID: Rep_987_c_7_46
Type: TC
Location: 54208 - 54462 (-)

Gene ID: Rep_987_c_7_47
Type: pfam
Location: 54669 - 55400 (+)

Gene ID: Rep_987_c_7_48
Type: CAZyme
Location: 55439 - 56050 (-)

Gene ID: Rep_987_c_7_49
Type: peptidase
Location: 56157 - 57071 (+)

Gene ID: Rep_987_c_7_50
Type: TC
Location: 57169 - 58902 (+)

Taxonomic Lineage

Domain

→

Phylum

→

Class

→

Order

→

Family

→

Genus

→

Species

Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Gene ID	Condition Pair	log2FC	FDR P-value
Rep_987_c_7_47	vegetarian > omnivore	2.39723	0.03112
Rep_987_c_7_47	vegetarian > vegan	2.24591	0.01926
Rep_987_c_7_48	vegetarian > omnivore	1.28932	0.03758
Rep_987_c_7_48	vegetarian > vegan	1.05395	0.01926