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Cluster: Rep_987_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_987_c_6 Rep_987_c_6_143 135221 136564 - 2.A.13.1.2
pfam Rep_987_c_6 Rep_987_c_6_144 136721 137224 - Ferritin
TC Rep_987_c_6 Rep_987_c_6_145 138012 139001 + 3.A.1.2.2
TC Rep_987_c_6 Rep_987_c_6_146 139073 140587 + 3.A.1.2.2
TC Rep_987_c_6 Rep_987_c_6_147 140602 141588 + 3.A.1.2.2
pfam Rep_987_c_6 Rep_987_c_6_148 141765 142568 + Trehalose_PPase
CAZyme Rep_987_c_6 Rep_987_c_6_149 142543 143967 + GT20
Gene ID: Rep_987_c_6_143
Type: TC
Location: 135221 - 136564 (-)
Gene ID: Rep_987_c_6_144
Type: pfam
Location: 136721 - 137224 (-)
Gene ID: Rep_987_c_6_145
Type: TC
Location: 138012 - 139001 (+)
Gene ID: Rep_987_c_6_146
Type: TC
Location: 139073 - 140587 (+)
Gene ID: Rep_987_c_6_147
Type: TC
Location: 140602 - 141588 (+)
Gene ID: Rep_987_c_6_148
Type: pfam
Location: 141765 - 142568 (+)
Gene ID: Rep_987_c_6_149
Type: CAZyme
Location: 142543 - 143967 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_987_c_6_148 vegetarian > omnivore 1.21635 0.03758
Rep_987_c_6_148 vegetarian > vegan 3.24843 0.01386

🧭 Explore Read Mapping of CGC

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