dbCAN Logo

Cluster: Rep_987_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_987_c_6 Rep_987_c_6_106 101683 103053 - 3.A.6.2.1
TC Rep_987_c_6 Rep_987_c_6_107 103053 103760 - 3.A.6.2.1
pfam Rep_987_c_6 Rep_987_c_6_108 103753 104751 - FliG_C | FliG_M | FliG_N
TC Rep_987_c_6 Rep_987_c_6_109 104744 106420 - 3.A.6.2.1
pfam Rep_987_c_6 Rep_987_c_6_110 106649 106963 + FliE
pfam Rep_987_c_6 Rep_987_c_6_111 107038 107451 + YedD
CAZyme Rep_987_c_6 Rep_987_c_6_112 107554 109044 - GH13_5
Gene ID: Rep_987_c_6_106
Type: TC
Location: 101683 - 103053 (-)
Gene ID: Rep_987_c_6_107
Type: TC
Location: 103053 - 103760 (-)
Gene ID: Rep_987_c_6_108
Type: pfam
Location: 103753 - 104751 (-)
Gene ID: Rep_987_c_6_109
Type: TC
Location: 104744 - 106420 (-)
Gene ID: Rep_987_c_6_110
Type: pfam
Location: 106649 - 106963 (+)
Gene ID: Rep_987_c_6_111
Type: pfam
Location: 107038 - 107451 (+)
Gene ID: Rep_987_c_6_112
Type: CAZyme
Location: 107554 - 109044 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_987_c_6_107 vegetarian > vegan 1.44217 0.01926
Rep_987_c_6_111 vegetarian > vegan 1.81409 0.01926

🧭 Explore Read Mapping of CGC

← Back to Cluster List