dbCAN HGM

Cluster: Rep_987_CGC3

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	Rep_987_c_0	Rep_987_c_0_220	226681	228468	+	GH13_10
CAZyme	Rep_987_c_0	Rep_987_c_0_221	228465	230933	+	GH13_26
CAZyme	Rep_987_c_0	Rep_987_c_0_222	230949	233021	+	CBM48 \| GH13_11
TF	Rep_987_c_0	Rep_987_c_0_223	233024	233569	-	0042156
pfam	Rep_987_c_0	Rep_987_c_0_224	233768	234490	+	DUF969
TC	Rep_987_c_0	Rep_987_c_0_225	234487	235473	+	9.B.211.1.1

Gene ID: Rep_987_c_0_220
Type: CAZyme
Location: 226681 - 228468 (+)

Gene ID: Rep_987_c_0_221
Type: CAZyme
Location: 228465 - 230933 (+)

Gene ID: Rep_987_c_0_222
Type: CAZyme
Location: 230949 - 233021 (+)

Gene ID: Rep_987_c_0_223
Type: TF
Location: 233024 - 233569 (-)

Gene ID: Rep_987_c_0_224
Type: pfam
Location: 233768 - 234490 (+)

Gene ID: Rep_987_c_0_225
Type: TC
Location: 234487 - 235473 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
Rep_987_c_0_221	vegetarian > omnivore	1.13215	0.03758
Rep_987_c_0_222	vegetarian > omnivore	2.79716	0.03758
Rep_987_c_0_222	vegetarian > vegan	1.78939	0.01926
Rep_987_c_0_223	vegetarian > omnivore	1.12336	0.03758
Rep_987_c_0_223	vegetarian > vegan	1.07338	0.01926
Rep_987_c_0_224	vegetarian > omnivore	1.02316	0.03758