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Cluster: Rep_987_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_987_c_5 Rep_987_c_5_19 21604 22077 + 4.A.6.1.4
TC Rep_987_c_5 Rep_987_c_5_20 22088 22867 + 4.A.6.1.4
TC Rep_987_c_5 Rep_987_c_5_21 22857 23735 + 4.A.6.1.4
TC Rep_987_c_5 Rep_987_c_5_22 23752 24186 + 4.A.6.1.2
CAZyme Rep_987_c_5 Rep_987_c_5_23 24183 25316 + CE9
STP Rep_987_c_5 Rep_987_c_5_24 25563 26711 + SIS | SIS
pfam Rep_987_c_5 Rep_987_c_5_25 26724 27596 + F_bP_aldolase
CAZyme Rep_987_c_5 Rep_987_c_5_26 27617 29506 + GH36
Gene ID: Rep_987_c_5_19
Type: TC
Location: 21604 - 22077 (+)
Gene ID: Rep_987_c_5_20
Type: TC
Location: 22088 - 22867 (+)
Gene ID: Rep_987_c_5_21
Type: TC
Location: 22857 - 23735 (+)
Gene ID: Rep_987_c_5_22
Type: TC
Location: 23752 - 24186 (+)
Gene ID: Rep_987_c_5_23
Type: CAZyme
Location: 24183 - 25316 (+)
Gene ID: Rep_987_c_5_24
Type: STP
Location: 25563 - 26711 (+)
Gene ID: Rep_987_c_5_25
Type: pfam
Location: 26724 - 27596 (+)
Gene ID: Rep_987_c_5_26
Type: CAZyme
Location: 27617 - 29506 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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