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Cluster: Rep_987_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_987_c_2 Rep_987_c_2_69 74011 74781 - 3.A.1.105.17
TC Rep_987_c_2 Rep_987_c_2_70 74778 75704 - 3.A.1.105.17
TC Rep_987_c_2 Rep_987_c_2_71 75812 76474 + 2.A.53.3.8
STP Rep_987_c_2 Rep_987_c_2_72 76525 77061 - Pribosyltran
pfam Rep_987_c_2 Rep_987_c_2_73 77270 79660 + PQQ | PQQ | PQQ | PQQ | PQQ | PQQ | PQQ_2
CAZyme Rep_987_c_2 Rep_987_c_2_74 79752 81359 - AA1
TC Rep_987_c_2 Rep_987_c_2_75 81490 81813 + 8.A.2.1.3
Gene ID: Rep_987_c_2_69
Type: TC
Location: 74011 - 74781 (-)
Gene ID: Rep_987_c_2_70
Type: TC
Location: 74778 - 75704 (-)
Gene ID: Rep_987_c_2_71
Type: TC
Location: 75812 - 76474 (+)
Gene ID: Rep_987_c_2_72
Type: STP
Location: 76525 - 77061 (-)
Gene ID: Rep_987_c_2_73
Type: pfam
Location: 77270 - 79660 (+)
Gene ID: Rep_987_c_2_74
Type: CAZyme
Location: 79752 - 81359 (-)
Gene ID: Rep_987_c_2_75
Type: TC
Location: 81490 - 81813 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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