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Cluster: Rep_963_CGC57

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_963_c_88 Rep_963_c_88_29 29320 30465 + 3.A.1.11.9
TC Rep_963_c_88 Rep_963_c_88_30 30482 31498 + 3.A.1.11.9
TC Rep_963_c_88 Rep_963_c_88_31 31499 32443 + 3.A.1.11.9
TC Rep_963_c_88 Rep_963_c_88_32 32433 33239 + 3.A.1.11.9
sulfatase Rep_963_c_88 Rep_963_c_88_33 33261 34685 + S1_6
NULL(UNKNOWN) Rep_963_c_88 Rep_963_c_88_34 34844 36331 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_963_c_88 Rep_963_c_88_35 36328 37263 - GT2
NULL(UNKNOWN) Rep_963_c_88 Rep_963_c_88_36 37883 38059 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_963_c_88 Rep_963_c_88_37 38358 38705 + DDE_3
TC Rep_963_c_88 Rep_963_c_88_38 39095 40219 - 2.A.1.2.42
Gene ID: Rep_963_c_88_29
Type: TC
Location: 29320 - 30465 (+)
Gene ID: Rep_963_c_88_30
Type: TC
Location: 30482 - 31498 (+)
Gene ID: Rep_963_c_88_31
Type: TC
Location: 31499 - 32443 (+)
Gene ID: Rep_963_c_88_32
Type: TC
Location: 32433 - 33239 (+)
Gene ID: Rep_963_c_88_33
Type: sulfatase
Location: 33261 - 34685 (+)
Gene ID: Rep_963_c_88_34
Type:
Location: 34844 - 36331 (-)
Gene ID: Rep_963_c_88_35
Type: CAZyme
Location: 36328 - 37263 (-)
Gene ID: Rep_963_c_88_36
Type:
Location: 37883 - 38059 (+)
Gene ID: Rep_963_c_88_37
Type: pfam
Location: 38358 - 38705 (+)
Gene ID: Rep_963_c_88_38
Type: TC
Location: 39095 - 40219 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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