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Cluster: Rep_963_CGC45

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_963_c_67 Rep_963_c_67_45 46004 46327 + 9.B.32.1.2
TC Rep_963_c_67 Rep_963_c_67_46 46333 47469 + 8.A.1.1.4
TF Rep_963_c_67 Rep_963_c_67_47 47486 48436 - HTH_1
TC Rep_963_c_67 Rep_963_c_67_48 48558 49298 + 9.B.99.1.1
CAZyme Rep_963_c_67 Rep_963_c_67_49 49386 51341 - GH127
TC Rep_963_c_67 Rep_963_c_67_50 51352 52752 - 2.A.2.3.4
Gene ID: Rep_963_c_67_45
Type: TC
Location: 46004 - 46327 (+)
Gene ID: Rep_963_c_67_46
Type: TC
Location: 46333 - 47469 (+)
Gene ID: Rep_963_c_67_47
Type: TF
Location: 47486 - 48436 (-)
Gene ID: Rep_963_c_67_48
Type: TC
Location: 48558 - 49298 (+)
Gene ID: Rep_963_c_67_49
Type: CAZyme
Location: 49386 - 51341 (-)
Gene ID: Rep_963_c_67_50
Type: TC
Location: 51352 - 52752 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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