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Cluster: Rep_963_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_963_c_50 Rep_963_c_50_60 68101 68643 - 1.B.68.1.1
STP Rep_963_c_50 Rep_963_c_50_61 68959 69384 + NUDIX
STP Rep_963_c_50 Rep_963_c_50_62 69677 70816 + Aminotran_1_2
CAZyme Rep_963_c_50 Rep_963_c_50_63 70819 71802 + GT2
pfam Rep_963_c_50 Rep_963_c_50_64 71799 73781 + Formyl_trans_N | 3Beta_HSD | Epimerase | Formyl_trans_C | GDP_Man_Dehyd
pfam Rep_963_c_50 Rep_963_c_50_65 73778 74680 + Polysacc_deac_1
CAZyme Rep_963_c_50 Rep_963_c_50_66 74677 76332 + GT83
TC Rep_963_c_50 Rep_963_c_50_67 76329 76664 + 2.A.7.22.2
TC Rep_963_c_50 Rep_963_c_50_68 76664 77050 + 2.A.7.22.2
Gene ID: Rep_963_c_50_60
Type: TC
Location: 68101 - 68643 (-)
Gene ID: Rep_963_c_50_61
Type: STP
Location: 68959 - 69384 (+)
Gene ID: Rep_963_c_50_62
Type: STP
Location: 69677 - 70816 (+)
Gene ID: Rep_963_c_50_63
Type: CAZyme
Location: 70819 - 71802 (+)
Gene ID: Rep_963_c_50_64
Type: pfam
Location: 71799 - 73781 (+)
Gene ID: Rep_963_c_50_65
Type: pfam
Location: 73778 - 74680 (+)
Gene ID: Rep_963_c_50_66
Type: CAZyme
Location: 74677 - 76332 (+)
Gene ID: Rep_963_c_50_67
Type: TC
Location: 76329 - 76664 (+)
Gene ID: Rep_963_c_50_68
Type: TC
Location: 76664 - 77050 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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