dbCAN Logo

Cluster: Rep_963_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_963_c_36 Rep_963_c_36_313 325456 327984 - 1.B.11.3.6
pfam Rep_963_c_36 Rep_963_c_36_314 327984 328679 - PapD_N | PapD_C
pfam Rep_963_c_36 Rep_963_c_36_315 328759 329334 - Fimbrial
TC Rep_963_c_36 Rep_963_c_36_316 329826 330977 + 3.A.6.2.1
TC Rep_963_c_36 Rep_963_c_36_317 330970 333048 + 3.A.6.2.1
pfam Rep_963_c_36 Rep_963_c_36_318 333048 333440 + FlhE
TC Rep_963_c_36 Rep_963_c_36_319 333701 335287 + 2.A.2.5.2
CAZyme Rep_963_c_36 Rep_963_c_36_320 335288 336427 + GH105
Gene ID: Rep_963_c_36_313
Type: TC
Location: 325456 - 327984 (-)
Gene ID: Rep_963_c_36_314
Type: pfam
Location: 327984 - 328679 (-)
Gene ID: Rep_963_c_36_315
Type: pfam
Location: 328759 - 329334 (-)
Gene ID: Rep_963_c_36_316
Type: TC
Location: 329826 - 330977 (+)
Gene ID: Rep_963_c_36_317
Type: TC
Location: 330970 - 333048 (+)
Gene ID: Rep_963_c_36_318
Type: pfam
Location: 333048 - 333440 (+)
Gene ID: Rep_963_c_36_319
Type: TC
Location: 333701 - 335287 (+)
Gene ID: Rep_963_c_36_320
Type: CAZyme
Location: 335288 - 336427 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List