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Cluster: Rep_963_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_963_c_36 Rep_963_c_36_252 267245 268615 - 3.A.6.2.1
TC Rep_963_c_36 Rep_963_c_36_253 268615 269322 - 3.A.6.2.1
pfam Rep_963_c_36 Rep_963_c_36_254 269315 270313 - FliG_C | FliG_M | FliG_N
TC Rep_963_c_36 Rep_963_c_36_255 270306 271979 - 3.A.6.2.1
pfam Rep_963_c_36 Rep_963_c_36_256 272196 272510 + FliE
pfam Rep_963_c_36 Rep_963_c_36_257 272565 272798 - TusA
TC Rep_963_c_36 Rep_963_c_36_258 272795 274000 - 9.B.102.1.1
pfam Rep_963_c_36 Rep_963_c_36_259 274186 274599 + YedD
CAZyme Rep_963_c_36 Rep_963_c_36_260 274640 276127 - GH13_5
Gene ID: Rep_963_c_36_252
Type: TC
Location: 267245 - 268615 (-)
Gene ID: Rep_963_c_36_253
Type: TC
Location: 268615 - 269322 (-)
Gene ID: Rep_963_c_36_254
Type: pfam
Location: 269315 - 270313 (-)
Gene ID: Rep_963_c_36_255
Type: TC
Location: 270306 - 271979 (-)
Gene ID: Rep_963_c_36_256
Type: pfam
Location: 272196 - 272510 (+)
Gene ID: Rep_963_c_36_257
Type: pfam
Location: 272565 - 272798 (-)
Gene ID: Rep_963_c_36_258
Type: TC
Location: 272795 - 274000 (-)
Gene ID: Rep_963_c_36_259
Type: pfam
Location: 274186 - 274599 (+)
Gene ID: Rep_963_c_36_260
Type: CAZyme
Location: 274640 - 276127 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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