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Cluster: Rep_963_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_963_c_36 Rep_963_c_36_147 169491 170453 + GT2
pfam Rep_963_c_36 Rep_963_c_36_148 170653 171267 + Hexapep
CAZyme Rep_963_c_36 Rep_963_c_36_149 171269 172312 + GT2
pfam Rep_963_c_36 Rep_963_c_36_150 172340 173611 + Wzy_C
CAZyme Rep_963_c_36 Rep_963_c_36_151 173611 174621 + GT4
CAZyme Rep_963_c_36 Rep_963_c_36_152 174608 175765 + GT4
pfam Rep_963_c_36 Rep_963_c_36_153 175804 177201 + NTP_transferase | MannoseP_isomer | Cupin_2 | ManC_GMP_beta-helix
pfam Rep_963_c_36 Rep_963_c_36_154 177209 178648 + PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II
TC Rep_963_c_36 Rep_963_c_36_155 178726 180156 + 9.B.18.1.2
Gene ID: Rep_963_c_36_147
Type: CAZyme
Location: 169491 - 170453 (+)
Gene ID: Rep_963_c_36_148
Type: pfam
Location: 170653 - 171267 (+)
Gene ID: Rep_963_c_36_149
Type: CAZyme
Location: 171269 - 172312 (+)
Gene ID: Rep_963_c_36_150
Type: pfam
Location: 172340 - 173611 (+)
Gene ID: Rep_963_c_36_151
Type: CAZyme
Location: 173611 - 174621 (+)
Gene ID: Rep_963_c_36_152
Type: CAZyme
Location: 174608 - 175765 (+)
Gene ID: Rep_963_c_36_153
Type: pfam
Location: 175804 - 177201 (+)
Gene ID: Rep_963_c_36_154
Type: pfam
Location: 177209 - 178648 (+)
Gene ID: Rep_963_c_36_155
Type: TC
Location: 178726 - 180156 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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