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Cluster: Rep_963_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_963_c_36 Rep_963_c_36_105 114926 116338 - 2.A.1.3.26
TC Rep_963_c_36 Rep_963_c_36_106 116335 119415 - 2.A.6.2.12
TC Rep_963_c_36 Rep_963_c_36_107 119416 122538 - 2.A.6.2.12
TC Rep_963_c_36 Rep_963_c_36_108 122538 123785 - 8.A.1.6.2
pfam Rep_963_c_36 Rep_963_c_36_109 124223 125575 - HSP70 | HSP70
STP Rep_963_c_36 Rep_963_c_36_110 125712 126581 + AlkA_N | HhH-GPD
TC Rep_963_c_36 Rep_963_c_36_111 126549 129929 - 9.B.34.1.1
pfam Rep_963_c_36 Rep_963_c_36_112 130195 130836 + PRK
pfam Rep_963_c_36 Rep_963_c_36_113 130928 131509 + DCD_N | DCD
TC Rep_963_c_36 Rep_963_c_36_114 131535 133388 + 9.B.22.2.1
TC Rep_963_c_36 Rep_963_c_36_115 133433 135034 - 2.A.109.2.3
TC Rep_963_c_36 Rep_963_c_36_116 135672 136811 + 1.B.18.3.1
pfam Rep_963_c_36 Rep_963_c_36_117 136817 137266 + LMWPc
TC Rep_963_c_36 Rep_963_c_36_118 137263 139425 + 8.A.3.3.2
CAZyme Rep_963_c_36 Rep_963_c_36_119 139502 140344 + GT2
pfam Rep_963_c_36 Rep_963_c_36_120 140347 140835 + Hexapep
CAZyme Rep_963_c_36 Rep_963_c_36_121 140832 142049 + GT4
NULL(UNKNOWN) Rep_963_c_36 Rep_963_c_36_122 142024 143241 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_963_c_36 Rep_963_c_36_123 143247 143993 + GT2
Gene ID: Rep_963_c_36_105
Type: TC
Location: 114926 - 116338 (-)
Gene ID: Rep_963_c_36_106
Type: TC
Location: 116335 - 119415 (-)
Gene ID: Rep_963_c_36_107
Type: TC
Location: 119416 - 122538 (-)
Gene ID: Rep_963_c_36_108
Type: TC
Location: 122538 - 123785 (-)
Gene ID: Rep_963_c_36_109
Type: pfam
Location: 124223 - 125575 (-)
Gene ID: Rep_963_c_36_110
Type: STP
Location: 125712 - 126581 (+)
Gene ID: Rep_963_c_36_111
Type: TC
Location: 126549 - 129929 (-)
Gene ID: Rep_963_c_36_112
Type: pfam
Location: 130195 - 130836 (+)
Gene ID: Rep_963_c_36_113
Type: pfam
Location: 130928 - 131509 (+)
Gene ID: Rep_963_c_36_114
Type: TC
Location: 131535 - 133388 (+)
Gene ID: Rep_963_c_36_115
Type: TC
Location: 133433 - 135034 (-)
Gene ID: Rep_963_c_36_116
Type: TC
Location: 135672 - 136811 (+)
Gene ID: Rep_963_c_36_117
Type: pfam
Location: 136817 - 137266 (+)
Gene ID: Rep_963_c_36_118
Type: TC
Location: 137263 - 139425 (+)
Gene ID: Rep_963_c_36_119
Type: CAZyme
Location: 139502 - 140344 (+)
Gene ID: Rep_963_c_36_120
Type: pfam
Location: 140347 - 140835 (+)
Gene ID: Rep_963_c_36_121
Type: CAZyme
Location: 140832 - 142049 (+)
Gene ID: Rep_963_c_36_122
Type:
Location: 142024 - 143241 (+)
Gene ID: Rep_963_c_36_123
Type: CAZyme
Location: 143247 - 143993 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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