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Cluster: Rep_963_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_963_c_32 Rep_963_c_32_35 36060 38597 + GT51
pfam Rep_963_c_32 Rep_963_c_32_36 38963 39505 + Fimbrial
pfam Rep_963_c_32 Rep_963_c_32_37 39549 40262 + PapD_N | PapD_C
TC Rep_963_c_32 Rep_963_c_32_38 40406 42889 + 1.B.11.3.6
pfam Rep_963_c_32 Rep_963_c_32_39 42919 43893 + Fimbrial
TC Rep_963_c_32 Rep_963_c_32_40 44101 46350 + 1.B.14.1.2
TC Rep_963_c_32 Rep_963_c_32_41 46398 47195 + 3.A.1.14.3
TC Rep_963_c_32 Rep_963_c_32_42 47195 48085 + 3.A.1.14.3
TC Rep_963_c_32 Rep_963_c_32_43 48082 50064 + 3.A.1.14.3
pfam Rep_963_c_32 Rep_963_c_32_44 50179 51459 - Aminotran_3
TC Rep_963_c_32 Rep_963_c_32_45 51628 53049 + 2.A.49.5.5
pfam Rep_963_c_32 Rep_963_c_32_46 53131 53475 + Fe-S_biosyn
TC Rep_963_c_32 Rep_963_c_32_47 53595 54218 - 1.A.62.2.2
TC Rep_963_c_32 Rep_963_c_32_48 54256 55056 - 3.A.1.13.1
Gene ID: Rep_963_c_32_35
Type: CAZyme
Location: 36060 - 38597 (+)
Gene ID: Rep_963_c_32_36
Type: pfam
Location: 38963 - 39505 (+)
Gene ID: Rep_963_c_32_37
Type: pfam
Location: 39549 - 40262 (+)
Gene ID: Rep_963_c_32_38
Type: TC
Location: 40406 - 42889 (+)
Gene ID: Rep_963_c_32_39
Type: pfam
Location: 42919 - 43893 (+)
Gene ID: Rep_963_c_32_40
Type: TC
Location: 44101 - 46350 (+)
Gene ID: Rep_963_c_32_41
Type: TC
Location: 46398 - 47195 (+)
Gene ID: Rep_963_c_32_42
Type: TC
Location: 47195 - 48085 (+)
Gene ID: Rep_963_c_32_43
Type: TC
Location: 48082 - 50064 (+)
Gene ID: Rep_963_c_32_44
Type: pfam
Location: 50179 - 51459 (-)
Gene ID: Rep_963_c_32_45
Type: TC
Location: 51628 - 53049 (+)
Gene ID: Rep_963_c_32_46
Type: pfam
Location: 53131 - 53475 (+)
Gene ID: Rep_963_c_32_47
Type: TC
Location: 53595 - 54218 (-)
Gene ID: Rep_963_c_32_48
Type: TC
Location: 54256 - 55056 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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