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Cluster: Rep_963_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_963_c_30 Rep_963_c_30_54 56787 57692 - 1.B.21.1.1
TC Rep_963_c_30 Rep_963_c_30_55 57772 58851 - 3.A.1.1.46
pfam Rep_963_c_30 Rep_963_c_30_56 58862 59530 - Hydrolase | HAD_2
CAZyme Rep_963_c_30 Rep_963_c_30_57 59527 61803 - GH65
CAZyme Rep_963_c_30 Rep_963_c_30_58 61800 62855 - GH179
pfam Rep_963_c_30 Rep_963_c_30_59 62866 63654 - AP_endonuc_2
pfam Rep_963_c_30 Rep_963_c_30_60 63671 64723 - ADH_zinc_N
TC Rep_963_c_30 Rep_963_c_30_61 64751 65593 - 3.A.1.1.46
TC Rep_963_c_30 Rep_963_c_30_62 65580 66482 - 3.A.1.1.46
TC Rep_963_c_30 Rep_963_c_30_63 66482 67774 - 3.A.1.1.46
CAZyme Rep_963_c_30 Rep_963_c_30_64 67788 69497 - GH13_18
Gene ID: Rep_963_c_30_54
Type: TC
Location: 56787 - 57692 (-)
Gene ID: Rep_963_c_30_55
Type: TC
Location: 57772 - 58851 (-)
Gene ID: Rep_963_c_30_56
Type: pfam
Location: 58862 - 59530 (-)
Gene ID: Rep_963_c_30_57
Type: CAZyme
Location: 59527 - 61803 (-)
Gene ID: Rep_963_c_30_58
Type: CAZyme
Location: 61800 - 62855 (-)
Gene ID: Rep_963_c_30_59
Type: pfam
Location: 62866 - 63654 (-)
Gene ID: Rep_963_c_30_60
Type: pfam
Location: 63671 - 64723 (-)
Gene ID: Rep_963_c_30_61
Type: TC
Location: 64751 - 65593 (-)
Gene ID: Rep_963_c_30_62
Type: TC
Location: 65580 - 66482 (-)
Gene ID: Rep_963_c_30_63
Type: TC
Location: 66482 - 67774 (-)
Gene ID: Rep_963_c_30_64
Type: CAZyme
Location: 67788 - 69497 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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