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Cluster: Rep_963_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_963_c_23 Rep_963_c_23_31 29474 31924 - GT35
NULL(UNKNOWN) Rep_963_c_23 Rep_963_c_23_32 31977 32174 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_963_c_23 Rep_963_c_23_33 32394 33701 + UPF0004 | Radical_SAM | TRAM_2
TC Rep_963_c_23 Rep_963_c_23_34 33756 34667 - 3.A.1.5.11
TC Rep_963_c_23 Rep_963_c_23_35 34670 35590 - 3.A.1.5.11
TC Rep_963_c_23 Rep_963_c_23_36 35637 37175 - 3.A.1.5.11
TC Rep_963_c_23 Rep_963_c_23_37 37204 39075 - 3.A.1.5.11
Gene ID: Rep_963_c_23_31
Type: CAZyme
Location: 29474 - 31924 (-)
Gene ID: Rep_963_c_23_32
Type:
Location: 31977 - 32174 (-)
Gene ID: Rep_963_c_23_33
Type: pfam
Location: 32394 - 33701 (+)
Gene ID: Rep_963_c_23_34
Type: TC
Location: 33756 - 34667 (-)
Gene ID: Rep_963_c_23_35
Type: TC
Location: 34670 - 35590 (-)
Gene ID: Rep_963_c_23_36
Type: TC
Location: 35637 - 37175 (-)
Gene ID: Rep_963_c_23_37
Type: TC
Location: 37204 - 39075 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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