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Cluster: Rep_963_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_963_c_16 Rep_963_c_16_87 100489 101724 - 3.A.15.2.1
TC Rep_963_c_16 Rep_963_c_16_88 101681 103063 - 3.A.15.2.1
TC Rep_963_c_16 Rep_963_c_16_89 103073 103510 - 3.A.15.2.1
pfam Rep_963_c_16 Rep_963_c_16_90 103735 104628 - QRPTase_C | QRPTase_N
pfam Rep_963_c_16 Rep_963_c_16_91 104716 105279 + Amidase_2
TC Rep_963_c_16 Rep_963_c_16_92 105276 106130 + 9.B.125.1.1
CAZyme Rep_963_c_16 Rep_963_c_16_93 106222 107172 - GH43_26
TC Rep_963_c_16 Rep_963_c_16_94 107172 108578 - 2.A.2.3.4
TC Rep_963_c_16 Rep_963_c_16_95 108736 110106 - 2.A.3.1.3
Gene ID: Rep_963_c_16_87
Type: TC
Location: 100489 - 101724 (-)
Gene ID: Rep_963_c_16_88
Type: TC
Location: 101681 - 103063 (-)
Gene ID: Rep_963_c_16_89
Type: TC
Location: 103073 - 103510 (-)
Gene ID: Rep_963_c_16_90
Type: pfam
Location: 103735 - 104628 (-)
Gene ID: Rep_963_c_16_91
Type: pfam
Location: 104716 - 105279 (+)
Gene ID: Rep_963_c_16_92
Type: TC
Location: 105276 - 106130 (+)
Gene ID: Rep_963_c_16_93
Type: CAZyme
Location: 106222 - 107172 (-)
Gene ID: Rep_963_c_16_94
Type: TC
Location: 107172 - 108578 (-)
Gene ID: Rep_963_c_16_95
Type: TC
Location: 108736 - 110106 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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