Cluster: Rep_960_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_960
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_960_c_12 | Rep_960_c_12_5 | 1776 | 2240 | - | 1.M.1.1.1 |
| CAZyme | Rep_960_c_12 | Rep_960_c_12_6 | 2237 | 2716 | - | GH104 |
| TC | Rep_960_c_12 | Rep_960_c_12_7 | 2700 | 3023 | - | 1.E.2.1.1 |
Gene ID: Rep_960_c_12_5
Type: TC
Location: 1776 - 2240 (-)
Type: TC
Location: 1776 - 2240 (-)
Gene ID: Rep_960_c_12_6
Type: CAZyme
Location: 2237 - 2716 (-)
Type: CAZyme
Location: 2237 - 2716 (-)
Gene ID: Rep_960_c_12_7
Type: TC
Location: 2700 - 3023 (-)
Type: TC
Location: 2700 - 3023 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter_A
Species
Citrobacter_A amalonaticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.