Cluster: Rep_960_CGC52
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_960
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_960_c_183 | Rep_960_c_183_18 | 16676 | 19381 | - | 3.A.5.1.1 |
| pfam | Rep_960_c_183 | Rep_960_c_183_19 | 19445 | 19951 | - | SecM |
| CAZyme | Rep_960_c_183 | Rep_960_c_183_20 | 20229 | 21146 | - | CE11 |
Gene ID: Rep_960_c_183_18
Type: TC
Location: 16676 - 19381 (-)
Type: TC
Location: 16676 - 19381 (-)
Gene ID: Rep_960_c_183_19
Type: pfam
Location: 19445 - 19951 (-)
Type: pfam
Location: 19445 - 19951 (-)
Gene ID: Rep_960_c_183_20
Type: CAZyme
Location: 20229 - 21146 (-)
Type: CAZyme
Location: 20229 - 21146 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter_A
Species
Citrobacter_A amalonaticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.