Cluster: Rep_960_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_960
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_960_c_9 | Rep_960_c_9_36 | 34115 | 35335 | + | 2.A.1.2.20 |
| pfam | Rep_960_c_9 | Rep_960_c_9_37 | 35417 | 35791 | + | MsyB |
| pfam | Rep_960_c_9 | Rep_960_c_9_38 | 35792 | 36019 | - | DUF1375 |
| CAZyme | Rep_960_c_9 | Rep_960_c_9_39 | 36104 | 38632 | - | GT2 |
Gene ID: Rep_960_c_9_36
Type: TC
Location: 34115 - 35335 (+)
Type: TC
Location: 34115 - 35335 (+)
Gene ID: Rep_960_c_9_37
Type: pfam
Location: 35417 - 35791 (+)
Type: pfam
Location: 35417 - 35791 (+)
Gene ID: Rep_960_c_9_38
Type: pfam
Location: 35792 - 36019 (-)
Type: pfam
Location: 35792 - 36019 (-)
Gene ID: Rep_960_c_9_39
Type: CAZyme
Location: 36104 - 38632 (-)
Type: CAZyme
Location: 36104 - 38632 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter_A
Species
Citrobacter_A amalonaticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.