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Cluster: Rep_960_CGC49

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_960_c_174 Rep_960_c_174_20 21616 21930 + 4.A.3.2.6
TC Rep_960_c_174 Rep_960_c_174_21 21943 23274 + 4.A.3.2.6
CAZyme Rep_960_c_174 Rep_960_c_174_22 23295 24677 + GH1
TC Rep_960_c_174 Rep_960_c_174_23 24690 24992 + 4.A.3.2.6
pfam Rep_960_c_174 Rep_960_c_174_24 25319 26698 + LamB
TC Rep_960_c_174 Rep_960_c_174_25 26810 28003 - 2.A.1.2.26
pfam Rep_960_c_174 Rep_960_c_174_26 28152 28604 - DUF1198
TC Rep_960_c_174 Rep_960_c_174_27 28657 29991 - 2.A.40.7.4
Gene ID: Rep_960_c_174_20
Type: TC
Location: 21616 - 21930 (+)
Gene ID: Rep_960_c_174_21
Type: TC
Location: 21943 - 23274 (+)
Gene ID: Rep_960_c_174_22
Type: CAZyme
Location: 23295 - 24677 (+)
Gene ID: Rep_960_c_174_23
Type: TC
Location: 24690 - 24992 (+)
Gene ID: Rep_960_c_174_24
Type: pfam
Location: 25319 - 26698 (+)
Gene ID: Rep_960_c_174_25
Type: TC
Location: 26810 - 28003 (-)
Gene ID: Rep_960_c_174_26
Type: pfam
Location: 28152 - 28604 (-)
Gene ID: Rep_960_c_174_27
Type: TC
Location: 28657 - 29991 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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