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Cluster: Rep_960_CGC46

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_960_c_172 Rep_960_c_172_4 3083 4759 - AA3_2
sulfatase Rep_960_c_172 Rep_960_c_172_5 4773 6245 - S1_6
STP Rep_960_c_172 Rep_960_c_172_6 6263 6853 - TetR_N
TC Rep_960_c_172 Rep_960_c_172_7 6980 9013 + 2.A.15.1.4
sulfatase Rep_960_c_172 Rep_960_c_172_8 9144 9947 - S1_2
pfam Rep_960_c_172 Rep_960_c_172_9 9965 10762 - adh_short | KR | adh_short_C2
TC Rep_960_c_172 Rep_960_c_172_10 10816 11883 - 3.A.1.2.11
TC Rep_960_c_172 Rep_960_c_172_11 11901 13445 - 3.A.1.2.11
pfam Rep_960_c_172 Rep_960_c_172_12 13447 14067 - DUF2291
TC Rep_960_c_172 Rep_960_c_172_13 14111 15046 - 3.A.1.2.11
Gene ID: Rep_960_c_172_4
Type: CAZyme
Location: 3083 - 4759 (-)
Gene ID: Rep_960_c_172_5
Type: sulfatase
Location: 4773 - 6245 (-)
Gene ID: Rep_960_c_172_6
Type: STP
Location: 6263 - 6853 (-)
Gene ID: Rep_960_c_172_7
Type: TC
Location: 6980 - 9013 (+)
Gene ID: Rep_960_c_172_8
Type: sulfatase
Location: 9144 - 9947 (-)
Gene ID: Rep_960_c_172_9
Type: pfam
Location: 9965 - 10762 (-)
Gene ID: Rep_960_c_172_10
Type: TC
Location: 10816 - 11883 (-)
Gene ID: Rep_960_c_172_11
Type: TC
Location: 11901 - 13445 (-)
Gene ID: Rep_960_c_172_12
Type: pfam
Location: 13447 - 14067 (-)
Gene ID: Rep_960_c_172_13
Type: TC
Location: 14111 - 15046 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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