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Cluster: Rep_960_CGC45

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_960_c_163 Rep_960_c_163_76 77934 80381 - GT35
CAZyme Rep_960_c_163 Rep_960_c_163_77 80401 81834 - GT5
pfam Rep_960_c_163 Rep_960_c_163_78 81837 83129 - NTP_transferase | NTP_transf_3 | Hexapep_GlmU
CAZyme Rep_960_c_163 Rep_960_c_163_79 83147 85120 - CBM48 | GH13_11
CAZyme Rep_960_c_163 Rep_960_c_163_80 85117 87303 - CBM48 | GH13_9
pfam Rep_960_c_163 Rep_960_c_163_81 87571 88677 - Semialdhyde_dh | Semialdhyde_dhC
TC Rep_960_c_163 Rep_960_c_163_82 88868 89461 + 2.A.95.1.5
TC Rep_960_c_163 Rep_960_c_163_83 89499 90764 - 2.A.8.1.8
Gene ID: Rep_960_c_163_76
Type: CAZyme
Location: 77934 - 80381 (-)
Gene ID: Rep_960_c_163_77
Type: CAZyme
Location: 80401 - 81834 (-)
Gene ID: Rep_960_c_163_78
Type: pfam
Location: 81837 - 83129 (-)
Gene ID: Rep_960_c_163_79
Type: CAZyme
Location: 83147 - 85120 (-)
Gene ID: Rep_960_c_163_80
Type: CAZyme
Location: 85117 - 87303 (-)
Gene ID: Rep_960_c_163_81
Type: pfam
Location: 87571 - 88677 (-)
Gene ID: Rep_960_c_163_82
Type: TC
Location: 88868 - 89461 (+)
Gene ID: Rep_960_c_163_83
Type: TC
Location: 89499 - 90764 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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