Cluster: Rep_960_CGC43
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_960
- CGC Family ID: CGCFAM_08848
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_960_c_160 | Rep_960_c_160_31 | 32089 | 33807 | + | 2.A.21.9.2 |
| NULL(UNKNOWN) | Rep_960_c_160 | Rep_960_c_160_32 | 33836 | 34237 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_960_c_160 | Rep_960_c_160_33 | 34563 | 35120 | + | GH23 |
Gene ID: Rep_960_c_160_31
Type: TC
Location: 32089 - 33807 (+)
Type: TC
Location: 32089 - 33807 (+)
Gene ID: Rep_960_c_160_32
Type:
Location: 33836 - 34237 (-)
Type:
Location: 33836 - 34237 (-)
Gene ID: Rep_960_c_160_33
Type: CAZyme
Location: 34563 - 35120 (+)
Type: CAZyme
Location: 34563 - 35120 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter_A
Species
Citrobacter_A amalonaticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.