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Cluster: Rep_960_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_960_c_147 Rep_960_c_147_191 172648 173394 - 9.B.158.1.2
pfam Rep_960_c_147 Rep_960_c_147_192 173397 173966 - YecM
pfam Rep_960_c_147 Rep_960_c_147_193 174205 175938 + tRNA-synt_1d | Arg_tRNA_synt_N | DALR_1
CAZyme Rep_960_c_147 Rep_960_c_147_194 175986 177125 - GH105
TC Rep_960_c_147 Rep_960_c_147_195 177130 178713 - 2.A.2.5.2
pfam Rep_960_c_147 Rep_960_c_147_196 178976 179368 - FlhE
TC Rep_960_c_147 Rep_960_c_147_197 179368 181446 - 3.A.6.2.1
TC Rep_960_c_147 Rep_960_c_147_198 181439 182587 - 3.A.6.2.1
Gene ID: Rep_960_c_147_191
Type: TC
Location: 172648 - 173394 (-)
Gene ID: Rep_960_c_147_192
Type: pfam
Location: 173397 - 173966 (-)
Gene ID: Rep_960_c_147_193
Type: pfam
Location: 174205 - 175938 (+)
Gene ID: Rep_960_c_147_194
Type: CAZyme
Location: 175986 - 177125 (-)
Gene ID: Rep_960_c_147_195
Type: TC
Location: 177130 - 178713 (-)
Gene ID: Rep_960_c_147_196
Type: pfam
Location: 178976 - 179368 (-)
Gene ID: Rep_960_c_147_197
Type: TC
Location: 179368 - 181446 (-)
Gene ID: Rep_960_c_147_198
Type: TC
Location: 181439 - 182587 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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