Cluster: Rep_960_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_960
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_960_c_9 | Rep_960_c_9_6 | 7239 | 8432 | + | 2.A.1.36.2 |
| pfam | Rep_960_c_9 | Rep_960_c_9_7 | 8516 | 9469 | - | Flagellin_N |
| pfam | Rep_960_c_9 | Rep_960_c_9_8 | 9484 | 11118 | - | Flg_bb_rod | Flg_bbr_C | flgK_1st_1 | FlgK_D1 |
| CAZyme | Rep_960_c_9 | Rep_960_c_9_9 | 11184 | 12134 | - | GH73 |
Gene ID: Rep_960_c_9_6
Type: TC
Location: 7239 - 8432 (+)
Type: TC
Location: 7239 - 8432 (+)
Gene ID: Rep_960_c_9_7
Type: pfam
Location: 8516 - 9469 (-)
Type: pfam
Location: 8516 - 9469 (-)
Gene ID: Rep_960_c_9_8
Type: pfam
Location: 9484 - 11118 (-)
Type: pfam
Location: 9484 - 11118 (-)
Gene ID: Rep_960_c_9_9
Type: CAZyme
Location: 11184 - 12134 (-)
Type: CAZyme
Location: 11184 - 12134 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter_A
Species
Citrobacter_A amalonaticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.