Cluster: Rep_960_CGC39
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_960
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_960_c_147 | Rep_960_c_147_116 | 120609 | 121931 | - | CBM50 |
| TC | Rep_960_c_147 | Rep_960_c_147_117 | 121947 | 122906 | - | 3.A.1.15.5 |
| TC | Rep_960_c_147 | Rep_960_c_147_118 | 122970 | 123725 | + | 3.A.1.15.5 |
| TC | Rep_960_c_147 | Rep_960_c_147_119 | 123722 | 124507 | + | 3.A.1.15.5 |
Gene ID: Rep_960_c_147_116
Type: CAZyme
Location: 120609 - 121931 (-)
Type: CAZyme
Location: 120609 - 121931 (-)
Gene ID: Rep_960_c_147_117
Type: TC
Location: 121947 - 122906 (-)
Type: TC
Location: 121947 - 122906 (-)
Gene ID: Rep_960_c_147_118
Type: TC
Location: 122970 - 123725 (+)
Type: TC
Location: 122970 - 123725 (+)
Gene ID: Rep_960_c_147_119
Type: TC
Location: 123722 - 124507 (+)
Type: TC
Location: 123722 - 124507 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter_A
Species
Citrobacter_A amalonaticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.