Cluster: Rep_960_CGC34
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_960
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_960_c_124 | Rep_960_c_124_28 | 22505 | 23710 | - | 9.B.102.1.1 |
| pfam | Rep_960_c_124 | Rep_960_c_124_29 | 23896 | 24309 | + | YedD |
| CAZyme | Rep_960_c_124 | Rep_960_c_124_30 | 24349 | 25836 | - | GH13_5 |
Gene ID: Rep_960_c_124_28
Type: TC
Location: 22505 - 23710 (-)
Type: TC
Location: 22505 - 23710 (-)
Gene ID: Rep_960_c_124_29
Type: pfam
Location: 23896 - 24309 (+)
Type: pfam
Location: 23896 - 24309 (+)
Gene ID: Rep_960_c_124_30
Type: CAZyme
Location: 24349 - 25836 (-)
Type: CAZyme
Location: 24349 - 25836 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter_A
Species
Citrobacter_A amalonaticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.