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Cluster: Rep_960_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_960_c_123 Rep_960_c_123_9 6522 8210 - 9.B.33.1.1
TF Rep_960_c_123 Rep_960_c_123_10 8433 9164 + MerR
NULL(UNKNOWN) Rep_960_c_123 Rep_960_c_123_11 9224 9331 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_960_c_123 Rep_960_c_123_12 9312 10043 - 3.A.1.12.15
TC Rep_960_c_123 Rep_960_c_123_13 10027 10974 - 3.A.1.12.15
TC Rep_960_c_123 Rep_960_c_123_14 10967 12124 - 3.A.1.12.15
TC Rep_960_c_123 Rep_960_c_123_15 12149 13066 - 3.A.1.12.15
CAZyme Rep_960_c_123 Rep_960_c_123_16 13208 15505 - GH3
Gene ID: Rep_960_c_123_9
Type: TC
Location: 6522 - 8210 (-)
Gene ID: Rep_960_c_123_10
Type: TF
Location: 8433 - 9164 (+)
Gene ID: Rep_960_c_123_11
Type:
Location: 9224 - 9331 (+)
Gene ID: Rep_960_c_123_12
Type: TC
Location: 9312 - 10043 (-)
Gene ID: Rep_960_c_123_13
Type: TC
Location: 10027 - 10974 (-)
Gene ID: Rep_960_c_123_14
Type: TC
Location: 10967 - 12124 (-)
Gene ID: Rep_960_c_123_15
Type: TC
Location: 12149 - 13066 (-)
Gene ID: Rep_960_c_123_16
Type: CAZyme
Location: 13208 - 15505 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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