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Cluster: Rep_960_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_960_c_111 Rep_960_c_111_29 34876 36162 - 2.A.23.1.7
STP Rep_960_c_111 Rep_960_c_111_30 36338 38326 - EAL | GGDEF
TC Rep_960_c_111 Rep_960_c_111_31 38419 41916 - 1.B.55.3.1
CAZyme Rep_960_c_111 Rep_960_c_111_32 41898 42977 - GH8
TC Rep_960_c_111 Rep_960_c_111_33 43011 45332 - 4.D.3.1.6
CAZyme Rep_960_c_111 Rep_960_c_111_34 45379 48000 - GT2
Gene ID: Rep_960_c_111_29
Type: TC
Location: 34876 - 36162 (-)
Gene ID: Rep_960_c_111_30
Type: STP
Location: 36338 - 38326 (-)
Gene ID: Rep_960_c_111_31
Type: TC
Location: 38419 - 41916 (-)
Gene ID: Rep_960_c_111_32
Type: CAZyme
Location: 41898 - 42977 (-)
Gene ID: Rep_960_c_111_33
Type: TC
Location: 43011 - 45332 (-)
Gene ID: Rep_960_c_111_34
Type: CAZyme
Location: 45379 - 48000 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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