Cluster: Rep_960_CGC27
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_960
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_960_c_100 | Rep_960_c_100_22 | 20460 | 21494 | + | GT2 |
| pfam | Rep_960_c_100 | Rep_960_c_100_23 | 21481 | 22440 | - | Polysacc_deac_2 |
| TC | Rep_960_c_100 | Rep_960_c_100_24 | 22444 | 23727 | - | 1.A.34.1.2 |
Gene ID: Rep_960_c_100_22
Type: CAZyme
Location: 20460 - 21494 (+)
Type: CAZyme
Location: 20460 - 21494 (+)
Gene ID: Rep_960_c_100_23
Type: pfam
Location: 21481 - 22440 (-)
Type: pfam
Location: 21481 - 22440 (-)
Gene ID: Rep_960_c_100_24
Type: TC
Location: 22444 - 23727 (-)
Type: TC
Location: 22444 - 23727 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter_A
Species
Citrobacter_A amalonaticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.