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Cluster: Rep_960_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_960_c_96 Rep_960_c_96_60 55001 56236 + 2.A.49.7.1
pfam Rep_960_c_96 Rep_960_c_96_61 56237 57892 - TPP_enzyme_M | TPP_enzyme_C | TPP_enzyme_N
TC Rep_960_c_96 Rep_960_c_96_62 58074 59084 + 8.A.5.1.3
pfam Rep_960_c_96 Rep_960_c_96_63 59199 59528 + DUF2502
TC Rep_960_c_96 Rep_960_c_96_64 59655 61214 + 4.A.1.1.3
pfam Rep_960_c_96 Rep_960_c_96_65 61231 62583 + Lyase_1 | ADSL_C
CAZyme Rep_960_c_96 Rep_960_c_96_66 62576 63787 + CE9
NULL(UNKNOWN) Rep_960_c_96 Rep_960_c_96_67 63780 65327 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_960_c_96 Rep_960_c_96_68 65416 66654 - 2.A.55.3.1
TC Rep_960_c_96 Rep_960_c_96_69 66996 68198 + 2.A.41.1.1
Gene ID: Rep_960_c_96_60
Type: TC
Location: 55001 - 56236 (+)
Gene ID: Rep_960_c_96_61
Type: pfam
Location: 56237 - 57892 (-)
Gene ID: Rep_960_c_96_62
Type: TC
Location: 58074 - 59084 (+)
Gene ID: Rep_960_c_96_63
Type: pfam
Location: 59199 - 59528 (+)
Gene ID: Rep_960_c_96_64
Type: TC
Location: 59655 - 61214 (+)
Gene ID: Rep_960_c_96_65
Type: pfam
Location: 61231 - 62583 (+)
Gene ID: Rep_960_c_96_66
Type: CAZyme
Location: 62576 - 63787 (+)
Gene ID: Rep_960_c_96_67
Type:
Location: 63780 - 65327 (-)
Gene ID: Rep_960_c_96_68
Type: TC
Location: 65416 - 66654 (-)
Gene ID: Rep_960_c_96_69
Type: TC
Location: 66996 - 68198 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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