Cluster: Rep_960_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_960
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_960_c_79 | Rep_960_c_79_25 | 30049 | 31269 | + | GH23 |
| pfam | Rep_960_c_79 | Rep_960_c_79_26 | 31318 | 32088 | - | Ubie_methyltran | Methyltransf_29 | TehB | Methyltransf_8 | MTS | PrmA | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| pfam | Rep_960_c_79 | Rep_960_c_79_27 | 32166 | 32945 | - | Exo_endo_phos |
| TC | Rep_960_c_79 | Rep_960_c_79_28 | 33098 | 34276 | - | 2.A.1.2.65 |
Gene ID: Rep_960_c_79_25
Type: CAZyme
Location: 30049 - 31269 (+)
Type: CAZyme
Location: 30049 - 31269 (+)
Gene ID: Rep_960_c_79_26
Type: pfam
Location: 31318 - 32088 (-)
Type: pfam
Location: 31318 - 32088 (-)
Gene ID: Rep_960_c_79_27
Type: pfam
Location: 32166 - 32945 (-)
Type: pfam
Location: 32166 - 32945 (-)
Gene ID: Rep_960_c_79_28
Type: TC
Location: 33098 - 34276 (-)
Type: TC
Location: 33098 - 34276 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter_A
Species
Citrobacter_A amalonaticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.