Cluster: Rep_960_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_960
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_960_c_75 | Rep_960_c_75_54 | 54354 | 55439 | + | GH23 |
| TC | Rep_960_c_75 | Rep_960_c_75_55 | 55652 | 56908 | + | 2.A.1.10.1 |
| pfam | Rep_960_c_75 | Rep_960_c_75_56 | 56960 | 59095 | - | OKR_DC_1 | OKR_DC_1_N | OKR_DC_1_C |
| TC | Rep_960_c_75 | Rep_960_c_75_57 | 59523 | 60230 | + | 9.B.120.1.1 |
Gene ID: Rep_960_c_75_54
Type: CAZyme
Location: 54354 - 55439 (+)
Type: CAZyme
Location: 54354 - 55439 (+)
Gene ID: Rep_960_c_75_55
Type: TC
Location: 55652 - 56908 (+)
Type: TC
Location: 55652 - 56908 (+)
Gene ID: Rep_960_c_75_56
Type: pfam
Location: 56960 - 59095 (-)
Type: pfam
Location: 56960 - 59095 (-)
Gene ID: Rep_960_c_75_57
Type: TC
Location: 59523 - 60230 (+)
Type: TC
Location: 59523 - 60230 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter_A
Species
Citrobacter_A amalonaticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.