Cluster: Rep_960_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_960
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_960_c_51 | Rep_960_c_51_10 | 8853 | 10103 | + | 2.A.66.2.3 |
| CAZyme | Rep_960_c_51 | Rep_960_c_51_11 | 10100 | 11179 | + | GT56 |
| TC | Rep_960_c_51 | Rep_960_c_51_12 | 11176 | 12528 | + | 9.B.128.1.1 |
| CAZyme | Rep_960_c_51 | Rep_960_c_51_13 | 12531 | 13271 | + | GT26 |
| TC | Rep_960_c_51 | Rep_960_c_51_14 | 13475 | 14860 | + | 2.A.3.1.15 |
Gene ID: Rep_960_c_51_10
Type: TC
Location: 8853 - 10103 (+)
Type: TC
Location: 8853 - 10103 (+)
Gene ID: Rep_960_c_51_11
Type: CAZyme
Location: 10100 - 11179 (+)
Type: CAZyme
Location: 10100 - 11179 (+)
Gene ID: Rep_960_c_51_12
Type: TC
Location: 11176 - 12528 (+)
Type: TC
Location: 11176 - 12528 (+)
Gene ID: Rep_960_c_51_13
Type: CAZyme
Location: 12531 - 13271 (+)
Type: CAZyme
Location: 12531 - 13271 (+)
Gene ID: Rep_960_c_51_14
Type: TC
Location: 13475 - 14860 (+)
Type: TC
Location: 13475 - 14860 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter_A
Species
Citrobacter_A amalonaticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.