Cluster: Rep_960_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_960
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_960_c_48 | Rep_960_c_48_16 | 18468 | 19160 | - | 1.B.35.2.2 |
| TC | Rep_960_c_48 | Rep_960_c_48_17 | 19228 | 20649 | - | 2.A.2.3.9 |
| TC | Rep_960_c_48 | Rep_960_c_48_18 | 20694 | 22076 | - | 2.A.2.3.9 |
| CAZyme | Rep_960_c_48 | Rep_960_c_48_19 | 22122 | 24158 | - | GH31_13 |
Gene ID: Rep_960_c_48_16
Type: TC
Location: 18468 - 19160 (-)
Type: TC
Location: 18468 - 19160 (-)
Gene ID: Rep_960_c_48_17
Type: TC
Location: 19228 - 20649 (-)
Type: TC
Location: 19228 - 20649 (-)
Gene ID: Rep_960_c_48_18
Type: TC
Location: 20694 - 22076 (-)
Type: TC
Location: 20694 - 22076 (-)
Gene ID: Rep_960_c_48_19
Type: CAZyme
Location: 22122 - 24158 (-)
Type: CAZyme
Location: 22122 - 24158 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter_A
Species
Citrobacter_A amalonaticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.