dbCAN Logo

Cluster: Rep_960_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_960_c_42 Rep_960_c_42_15 16968 17441 + 4.A.6.1.4
TC Rep_960_c_42 Rep_960_c_42_16 17452 18231 + 4.A.6.1.4
TC Rep_960_c_42 Rep_960_c_42_17 18221 19099 + 4.A.6.1.4
TC Rep_960_c_42 Rep_960_c_42_18 19116 19550 + 4.A.6.1.6
CAZyme Rep_960_c_42 Rep_960_c_42_19 19547 20680 + CE9
STP Rep_960_c_42 Rep_960_c_42_20 20975 22129 + SIS | SIS
pfam Rep_960_c_42 Rep_960_c_42_21 22142 23017 + F_bP_aldolase
TC Rep_960_c_42 Rep_960_c_42_22 23206 23682 + 4.A.6.1.5
TC Rep_960_c_42 Rep_960_c_42_23 23737 24543 + 4.A.6.1.5
TC Rep_960_c_42 Rep_960_c_42_24 24533 25324 + 4.A.6.1.5
Gene ID: Rep_960_c_42_15
Type: TC
Location: 16968 - 17441 (+)
Gene ID: Rep_960_c_42_16
Type: TC
Location: 17452 - 18231 (+)
Gene ID: Rep_960_c_42_17
Type: TC
Location: 18221 - 19099 (+)
Gene ID: Rep_960_c_42_18
Type: TC
Location: 19116 - 19550 (+)
Gene ID: Rep_960_c_42_19
Type: CAZyme
Location: 19547 - 20680 (+)
Gene ID: Rep_960_c_42_20
Type: STP
Location: 20975 - 22129 (+)
Gene ID: Rep_960_c_42_21
Type: pfam
Location: 22142 - 23017 (+)
Gene ID: Rep_960_c_42_22
Type: TC
Location: 23206 - 23682 (+)
Gene ID: Rep_960_c_42_23
Type: TC
Location: 23737 - 24543 (+)
Gene ID: Rep_960_c_42_24
Type: TC
Location: 24533 - 25324 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List