dbCAN Logo

Cluster: Rep_958_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_958_c_123 Rep_958_c_123_21 16733 19687 - 1.B.12.2.7
pfam Rep_958_c_123 Rep_958_c_123_22 20214 21188 + ALAD
sulfatase Rep_958_c_123 Rep_958_c_123_23 21346 22197 - S2
TC Rep_958_c_123 Rep_958_c_123_24 22194 23021 - 3.A.1.17.1
TC Rep_958_c_123 Rep_958_c_123_25 23018 23785 - 3.A.1.17.1
TC Rep_958_c_123 Rep_958_c_123_26 23798 24760 - 3.A.1.17.1
CAZyme Rep_958_c_123 Rep_958_c_123_27 25380 26051 + CE14
CAZyme Rep_958_c_123 Rep_958_c_123_28 26061 27257 + GT2
pfam Rep_958_c_123 Rep_958_c_123_29 27292 27816 + Hexapep
TC Rep_958_c_123 Rep_958_c_123_30 27818 28591 + 9.B.52.1.1
Gene ID: Rep_958_c_123_21
Type: TC
Location: 16733 - 19687 (-)
Gene ID: Rep_958_c_123_22
Type: pfam
Location: 20214 - 21188 (+)
Gene ID: Rep_958_c_123_23
Type: sulfatase
Location: 21346 - 22197 (-)
Gene ID: Rep_958_c_123_24
Type: TC
Location: 22194 - 23021 (-)
Gene ID: Rep_958_c_123_25
Type: TC
Location: 23018 - 23785 (-)
Gene ID: Rep_958_c_123_26
Type: TC
Location: 23798 - 24760 (-)
Gene ID: Rep_958_c_123_27
Type: CAZyme
Location: 25380 - 26051 (+)
Gene ID: Rep_958_c_123_28
Type: CAZyme
Location: 26061 - 27257 (+)
Gene ID: Rep_958_c_123_29
Type: pfam
Location: 27292 - 27816 (+)
Gene ID: Rep_958_c_123_30
Type: TC
Location: 27818 - 28591 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_958_c_123_28 omnivore > vegetarian 2.54853 0.03416
Rep_958_c_123_30 omnivore > vegetarian 1.56133 0.04169

🧭 Explore Read Mapping of CGC

← Back to Cluster List